I'm in almost in the exact situation. I been treating my candida for six months. I've gone from candida induced hypothryroidism to 80%-90% recovered. Lately it seems like nature has been moving the goal posts. Everytime complete recovery seems within grasp I have a set back. Right now, tinnitus and insomnia have returned for some unknown reason. I'm going to continue my strict diet, and continue the anti-fungals.
I suppose it is possible that our bodies might have different nutritional needs as we recover. I may adjust my regimen of vitamins and suppliments. I've been patient this far, I can be patient for as long as it takes.